Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 ZNF259P1-201ENST00000407656 1365 ntBASIC15.68■□□□□ 0.1
CDH13P55290 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.68■□□□□ 0.1
CDH13P55290 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CDH13P55290 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH13P55290 AC112191.1-201ENST00000523689 701 ntBASIC15.68■□□□□ 0.1
CDH13P55290 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH13P55290 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.68■□□□□ 0.1
CDH13P55290 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH13P55290 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH13P55290 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDH13P55290 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH13P55290 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CDH13P55290 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH13P55290 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH13P55290 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH13P55290 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH13P55290 LINC02228-204ENST00000642115 2962 ntBASIC15.68■□□□□ 0.1
CDH13P55290 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CDH13P55290 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDH13P55290 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH13P55290 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH13P55290 FOXO1B-201ENST00000504678 1527 ntBASIC15.68■□□□□ 0.1
CDH13P55290 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH13P55290 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH13P55290 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDH13P55290 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 AC087481.3-201ENST00000602886 1894 ntBASIC15.67■□□□□ 0.1
CDH13P55290 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
CDH13P55290 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDH13P55290 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH13P55290 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CDH13P55290 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH13P55290 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH13P55290 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH13P55290 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH13P55290 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH13P55290 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH13P55290 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.67■□□□□ 0.1
CDH13P55290 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH13P55290 RARRES2P8-201ENST00000566335 367 ntBASIC15.67■□□□□ 0.1
CDH13P55290 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH13P55290 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH13P55290 AL121894.2-201ENST00000602977 491 ntBASIC15.67■□□□□ 0.1
CDH13P55290 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
CDH13P55290 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH13P55290 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 TMBIM7P-203ENST00000641617 1718 ntBASIC15.67■□□□□ 0.1
CDH13P55290 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CDH13P55290 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH13P55290 AC105250.1-201ENST00000509378 2057 ntBASIC15.67■□□□□ 0.1
CDH13P55290 AC023157.3-201ENST00000619086 2088 ntBASIC15.67■□□□□ 0.1
CDH13P55290 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH13P55290 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDH13P55290 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDH13P55290 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH13P55290 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH13P55290 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDH13P55290 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDH13P55290 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH13P55290 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH13P55290 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH13P55290 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH13P55290 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH13P55290 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms