Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CDH11P55287 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDH11P55287 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDH11P55287 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH11P55287 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH11P55287 MKNK2P1-201ENST00000437526 628 ntBASIC14.73□□□□□ -0.05
CDH11P55287 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH11P55287 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH11P55287 YBX1P5-201ENST00000509441 847 ntBASIC14.73□□□□□ -0.05
CDH11P55287 SNHG9-202ENST00000564014 471 ntBASIC14.73□□□□□ -0.05
CDH11P55287 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
CDH11P55287 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH11P55287 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH11P55287 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH11P55287 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 TNRC18P2-201ENST00000417666 2714 ntBASIC14.73□□□□□ -0.05
CDH11P55287 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 AC023157.3-201ENST00000619086 2088 ntBASIC14.73□□□□□ -0.05
CDH11P55287 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH11P55287 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH11P55287 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH11P55287 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH11P55287 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDH11P55287 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH11P55287 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDH11P55287 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH11P55287 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH11P55287 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH11P55287 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH11P55287 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH11P55287 SSR4P1-203ENST00000599569 2260 ntBASIC14.72□□□□□ -0.05
CDH11P55287 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH11P55287 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDH11P55287 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH11P55287 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH11P55287 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH11P55287 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH11P55287 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH11P55287 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CDH11P55287 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH11P55287 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH11P55287 FAM58CP-201ENST00000435741 640 ntBASIC14.72□□□□□ -0.05
CDH11P55287 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH11P55287 CEND1P1-201ENST00000451006 455 ntBASIC14.72□□□□□ -0.05
CDH11P55287 AC074386.1-202ENST00000463561 864 ntBASIC14.72□□□□□ -0.05
CDH11P55287 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH11P55287 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH11P55287 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH11P55287 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH11P55287 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.72□□□□□ -0.05
CDH11P55287 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CDH11P55287 AC099063.4-201ENST00000641099 1602 ntBASIC14.72□□□□□ -0.05
CDH11P55287 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH11P55287 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
CDH11P55287 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDH11P55287 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDH11P55287 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CDH11P55287 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 U82695.1-201ENST00000635752 1889 ntBASIC14.72□□□□□ -0.05
CDH11P55287 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH11P55287 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH11P55287 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH11P55287 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms