Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH6P55285 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDH6P55285 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH6P55285 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CDH6P55285 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.66■□□□□ 0.26
CDH6P55285 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH6P55285 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 NORAD-201ENST00000565493 5339 ntBASIC16.66■□□□□ 0.26
CDH6P55285 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH6P55285 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 AC018892.3-201ENST00000623986 2499 ntBASIC16.65■□□□□ 0.26
CDH6P55285 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH6P55285 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH6P55285 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.65■□□□□ 0.26
CDH6P55285 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH6P55285 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.65■□□□□ 0.26
CDH6P55285 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.65■□□□□ 0.26
CDH6P55285 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH6P55285 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 AC004987.2-201ENST00000395959 1148 ntBASIC16.65■□□□□ 0.26
CDH6P55285 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH6P55285 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 AP006288.1-201ENST00000446065 395 ntBASIC16.65■□□□□ 0.26
CDH6P55285 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH6P55285 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH6P55285 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.65■□□□□ 0.26
CDH6P55285 ALG1L8P-201ENST00000533887 760 ntBASIC16.65■□□□□ 0.26
CDH6P55285 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.65■□□□□ 0.26
CDH6P55285 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH6P55285 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.65■□□□□ 0.26
CDH6P55285 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH6P55285 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDH6P55285 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDH6P55285 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH6P55285 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDH6P55285 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.65■□□□□ 0.26
CDH6P55285 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH6P55285 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CDH6P55285 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CDH6P55285 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CDH6P55285 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
CDH6P55285 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDH6P55285 AC092850.2-201ENST00000623821 2697 ntBASIC16.64■□□□□ 0.26
CDH6P55285 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDH6P55285 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH6P55285 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH6P55285 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH6P55285 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH6P55285 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH6P55285 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH6P55285 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDH6P55285 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH6P55285 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH6P55285 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CDH6P55285 AC254562.1-201ENST00000417586 456 ntBASIC16.64■□□□□ 0.25
CDH6P55285 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH6P55285 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH6P55285 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH6P55285 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.64■□□□□ 0.25
CDH6P55285 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH6P55285 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CDH6P55285 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
CDH6P55285 AC004835.2-201ENST00000603762 682 ntBASIC16.64■□□□□ 0.25
CDH6P55285 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH6P55285 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDH6P55285 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH6P55285 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDH6P55285 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDH6P55285 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH6P55285 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH6P55285 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDH6P55285 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDH6P55285 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH6P55285 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDH6P55285 REXO1L1P-202ENST00000608646 1974 ntBASIC16.64■□□□□ 0.25
CDH6P55285 CYP4F24P-201ENST00000586049 1580 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms