Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.76■□□□□ 0.59
NEDD4P46934 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.76■□□□□ 0.59
NEDD4P46934 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEDD4P46934 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEDD4P46934 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.76■□□□□ 0.59
NEDD4P46934 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.76■□□□□ 0.59
NEDD4P46934 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEDD4P46934 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEDD4P46934 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEDD4P46934 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEDD4P46934 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEDD4P46934 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.76■□□□□ 0.59
NEDD4P46934 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.76■□□□□ 0.59
NEDD4P46934 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEDD4P46934 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.76■□□□□ 0.59
NEDD4P46934 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 AC114501.2-201ENST00000439631 535 ntBASIC18.75■□□□□ 0.59
NEDD4P46934 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.75■□□□□ 0.59
NEDD4P46934 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.75■□□□□ 0.59
NEDD4P46934 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.75■□□□□ 0.59
NEDD4P46934 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.75■□□□□ 0.59
NEDD4P46934 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.75■□□□□ 0.59
NEDD4P46934 SERBP1P5-201ENST00000510079 1181 ntBASIC18.75■□□□□ 0.59
NEDD4P46934 AC135586.1-201ENST00000539323 574 ntBASIC18.75■□□□□ 0.59
NEDD4P46934 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.75■□□□□ 0.59
NEDD4P46934 AC074044.1-201ENST00000609673 707 ntBASIC18.75■□□□□ 0.59
NEDD4P46934 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 OR6D1P-203ENST00000641209 4860 ntBASIC18.75■□□□□ 0.59
NEDD4P46934 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.75■□□□□ 0.59
NEDD4P46934 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.75■□□□□ 0.59
NEDD4P46934 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.75■□□□□ 0.59
NEDD4P46934 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
NEDD4P46934 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NEDD4P46934 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.75■□□□□ 0.59
NEDD4P46934 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
NEDD4P46934 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEDD4P46934 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.75■□□□□ 0.59
NEDD4P46934 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.74■□□□□ 0.59
NEDD4P46934 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.74■□□□□ 0.59
NEDD4P46934 FAM8A3P-201ENST00000427218 844 ntBASIC18.74■□□□□ 0.59
NEDD4P46934 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 SDHAP3-202ENST00000515467 728 ntBASIC18.74■□□□□ 0.59
NEDD4P46934 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NEDD4P46934 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.74■□□□□ 0.59
NEDD4P46934 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NEDD4P46934 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.74■□□□□ 0.59
NEDD4P46934 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.74■□□□□ 0.59
NEDD4P46934 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NEDD4P46934 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.74■□□□□ 0.59
NEDD4P46934 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
NEDD4P46934 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NEDD4P46934 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NEDD4P46934 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.74■□□□□ 0.59
NEDD4P46934 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.74■□□□□ 0.59
NEDD4P46934 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.74■□□□□ 0.59
NEDD4P46934 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NEDD4P46934 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
NEDD4P46934 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NEDD4P46934 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 LINC00554-201ENST00000564841 3011 ntBASIC18.74■□□□□ 0.59
NEDD4P46934 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NEDD4P46934 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.74■□□□□ 0.59
NEDD4P46934 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.74■□□□□ 0.59
NEDD4P46934 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
NEDD4P46934 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEDD4P46934 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.74■□□□□ 0.59
NEDD4P46934 RPL13P2-201ENST00000440687 659 ntBASIC18.74■□□□□ 0.59
NEDD4P46934 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.74■□□□□ 0.59
NEDD4P46934 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.74■□□□□ 0.59
NEDD4P46934 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.74■□□□□ 0.59
NEDD4P46934 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.74■□□□□ 0.59
NEDD4P46934 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEDD4P46934 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.73■□□□□ 0.59
NEDD4P46934 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms