Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKN2CP42773 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 AC112693.3-201ENST00000624819 1983 ntBASIC15.15■□□□□ 0.02
CDKN2CP42773 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2CP42773 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKN2CP42773 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDKN2CP42773 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2CP42773 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2CP42773 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDKN2CP42773 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKN2CP42773 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKN2CP42773 AC061975.2-201ENST00000581722 295 ntBASIC15.15■□□□□ 0.02
CDKN2CP42773 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKN2CP42773 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKN2CP42773 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDKN2CP42773 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDKN2CP42773 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDKN2CP42773 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
CDKN2CP42773 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2CP42773 BNIP3P1-202ENST00000550043 1585 ntBASIC15.15■□□□□ 0.02
CDKN2CP42773 AC091951.1-201ENST00000512854 2465 ntBASIC15.15■□□□□ 0.02
CDKN2CP42773 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2CP42773 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2CP42773 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKN2CP42773 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDKN2CP42773 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CDKN2CP42773 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKN2CP42773 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKN2CP42773 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
CDKN2CP42773 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CDKN2CP42773 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKN2CP42773 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CDKN2CP42773 AC002056.1-201ENST00000395613 760 ntBASIC15.14■□□□□ 0.01
CDKN2CP42773 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKN2CP42773 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
CDKN2CP42773 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKN2CP42773 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CDKN2CP42773 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKN2CP42773 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKN2CP42773 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDKN2CP42773 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKN2CP42773 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDKN2CP42773 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.14■□□□□ 0.01
CDKN2CP42773 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKN2CP42773 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 IL9RP2-201ENST00000423948 1312 ntBASIC15.14■□□□□ 0.01
CDKN2CP42773 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKN2CP42773 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2CP42773 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKN2CP42773 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.13■□□□□ 0.01
CDKN2CP42773 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDKN2CP42773 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2CP42773 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2CP42773 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.13■□□□□ 0.01
CDKN2CP42773 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.13■□□□□ 0.01
CDKN2CP42773 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2CP42773 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2CP42773 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2CP42773 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
CDKN2CP42773 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.13■□□□□ 0.01
CDKN2CP42773 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2CP42773 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2CP42773 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.13■□□□□ 0.01
CDKN2CP42773 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2CP42773 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms