Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHKAP35790 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.91■□□□□ 0.3
CHKAP35790 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.9■□□□□ 0.3
CHKAP35790 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.9■□□□□ 0.3
CHKAP35790 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.9■□□□□ 0.3
CHKAP35790 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.9■□□□□ 0.3
CHKAP35790 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CHKAP35790 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.9■□□□□ 0.3
CHKAP35790 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.9■□□□□ 0.3
CHKAP35790 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 INGX-202ENST00000489074 768 ntBASIC16.9■□□□□ 0.3
CHKAP35790 AC097493.3-201ENST00000509725 367 ntBASIC16.9■□□□□ 0.3
CHKAP35790 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.9■□□□□ 0.3
CHKAP35790 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.9■□□□□ 0.3
CHKAP35790 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.9■□□□□ 0.3
CHKAP35790 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.9■□□□□ 0.3
CHKAP35790 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.9■□□□□ 0.3
CHKAP35790 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.9■□□□□ 0.3
CHKAP35790 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.9■□□□□ 0.3
CHKAP35790 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.9■□□□□ 0.3
CHKAP35790 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
CHKAP35790 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CHKAP35790 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.9■□□□□ 0.3
CHKAP35790 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHKAP35790 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHKAP35790 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.9■□□□□ 0.3
CHKAP35790 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CHKAP35790 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CHKAP35790 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHKAP35790 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CHKAP35790 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CHKAP35790 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.89■□□□□ 0.29
CHKAP35790 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHKAP35790 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.89■□□□□ 0.29
CHKAP35790 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHKAP35790 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.89■□□□□ 0.29
CHKAP35790 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.89■□□□□ 0.29
CHKAP35790 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CHKAP35790 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.89■□□□□ 0.29
CHKAP35790 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.89■□□□□ 0.29
CHKAP35790 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.89■□□□□ 0.29
CHKAP35790 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.89■□□□□ 0.29
CHKAP35790 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.89■□□□□ 0.29
CHKAP35790 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
CHKAP35790 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 AL589702.1-201ENST00000641229 1509 ntBASIC16.89■□□□□ 0.29
CHKAP35790 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.89■□□□□ 0.29
CHKAP35790 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.89■□□□□ 0.29
CHKAP35790 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.89■□□□□ 0.29
CHKAP35790 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHKAP35790 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.88■□□□□ 0.29
CHKAP35790 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CHKAP35790 PPT1-215ENST00000641471 2368 ntBASIC16.88■□□□□ 0.29
CHKAP35790 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHKAP35790 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHKAP35790 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHKAP35790 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CHKAP35790 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.88■□□□□ 0.29
CHKAP35790 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHKAP35790 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHKAP35790 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.88■□□□□ 0.29
CHKAP35790 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHKAP35790 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHKAP35790 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHKAP35790 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHKAP35790 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHKAP35790 AL512638.1-201ENST00000457493 794 ntBASIC16.88■□□□□ 0.29
CHKAP35790 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.88■□□□□ 0.29
CHKAP35790 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.88■□□□□ 0.29
CHKAP35790 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHKAP35790 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms