Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 TIMM8BP1-201ENST00000452384 211 ntBASIC15.02■□□□□ -0
CHMP24386 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.02■□□□□ -0
CHMP24386 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.02■□□□□ -0
CHMP24386 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP24386 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP24386 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP24386 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP24386 TNRC18P2-201ENST00000417666 2714 ntBASIC15.02□□□□□ -0.01
CHMP24386 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP24386 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CHMP24386 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.02□□□□□ -0.01
CHMP24386 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP24386 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CHMP24386 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CHMP24386 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CHMP24386 AP002414.2-201ENST00000591780 3365 ntBASIC15.02□□□□□ -0.01
CHMP24386 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP24386 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP24386 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP24386 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CHMP24386 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CHMP24386 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP24386 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP24386 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP24386 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP24386 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP24386 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP24386 AC004461.1-201ENST00000412461 403 ntBASIC15.01□□□□□ -0.01
CHMP24386 PMS2P2-201ENST00000425039 1128 ntBASIC15.01□□□□□ -0.01
CHMP24386 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP24386 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CHMP24386 KRT8P48-201ENST00000515599 1220 ntBASIC15.01□□□□□ -0.01
CHMP24386 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP24386 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.01□□□□□ -0.01
CHMP24386 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CHMP24386 AC243562.1-201ENST00000560672 389 ntBASIC15.01□□□□□ -0.01
CHMP24386 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.01□□□□□ -0.01
CHMP24386 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP24386 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.01□□□□□ -0.01
CHMP24386 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP24386 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP24386 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.01□□□□□ -0.01
CHMP24386 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP24386 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP24386 AC020765.3-201ENST00000613051 740 ntBASIC15.01□□□□□ -0.01
CHMP24386 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP24386 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CHMP24386 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CHMP24386 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.01□□□□□ -0.01
CHMP24386 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP24386 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHMP24386 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP24386 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP24386 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
CHMP24386 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CHMP24386 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHMP24386 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
CHMP24386 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHMP24386 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15□□□□□ -0.01
CHMP24386 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15□□□□□ -0.01
CHMP24386 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
CHMP24386 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
CHMP24386 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15□□□□□ -0.01
CHMP24386 KRT18P34-201ENST00000488218 1270 ntBASIC15□□□□□ -0.01
CHMP24386 AC079140.1-201ENST00000508039 487 ntBASIC15□□□□□ -0.01
CHMP24386 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CHMP24386 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15□□□□□ -0.01
CHMP24386 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms