Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMPD1P17405 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMPD1P17405 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.62■□□□□ 0.41
SMPD1P17405 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMPD1P17405 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMPD1P17405 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
SMPD1P17405 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMPD1P17405 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMPD1P17405 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SMPD1P17405 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.62■□□□□ 0.41
SMPD1P17405 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.62■□□□□ 0.41
SMPD1P17405 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SMPD1P17405 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.62■□□□□ 0.41
SMPD1P17405 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.62■□□□□ 0.41
SMPD1P17405 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMPD1P17405 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.62■□□□□ 0.41
SMPD1P17405 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.62■□□□□ 0.41
SMPD1P17405 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.62■□□□□ 0.41
SMPD1P17405 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMPD1P17405 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.62■□□□□ 0.41
SMPD1P17405 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMPD1P17405 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
SMPD1P17405 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SMPD1P17405 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.61■□□□□ 0.41
SMPD1P17405 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
SMPD1P17405 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.61■□□□□ 0.41
SMPD1P17405 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.61■□□□□ 0.41
SMPD1P17405 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.61■□□□□ 0.41
SMPD1P17405 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.61■□□□□ 0.41
SMPD1P17405 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.61■□□□□ 0.41
SMPD1P17405 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 AC108725.1-201ENST00000495472 409 ntBASIC17.61■□□□□ 0.41
SMPD1P17405 AC022137.2-201ENST00000503482 481 ntBASIC17.61■□□□□ 0.41
SMPD1P17405 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.61■□□□□ 0.41
SMPD1P17405 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 KRT90P-201ENST00000549264 1064 ntBASIC17.61■□□□□ 0.41
SMPD1P17405 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.61■□□□□ 0.41
SMPD1P17405 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.61■□□□□ 0.41
SMPD1P17405 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.61■□□□□ 0.41
SMPD1P17405 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.61■□□□□ 0.41
SMPD1P17405 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.61■□□□□ 0.41
SMPD1P17405 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.61■□□□□ 0.41
SMPD1P17405 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.61■□□□□ 0.41
SMPD1P17405 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.61■□□□□ 0.41
SMPD1P17405 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.61■□□□□ 0.41
SMPD1P17405 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.61■□□□□ 0.41
SMPD1P17405 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.61■□□□□ 0.41
SMPD1P17405 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMPD1P17405 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.6■□□□□ 0.41
SMPD1P17405 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SMPD1P17405 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.6■□□□□ 0.41
SMPD1P17405 ACKR1-201ENST00000368121 1240 ntBASIC17.6■□□□□ 0.41
SMPD1P17405 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.6■□□□□ 0.41
SMPD1P17405 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.6■□□□□ 0.41
SMPD1P17405 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.6■□□□□ 0.41
SMPD1P17405 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SMPD1P17405 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 AC107373.2-201ENST00000607735 490 ntBASIC17.6■□□□□ 0.41
SMPD1P17405 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.6■□□□□ 0.41
SMPD1P17405 KRT8P44-201ENST00000441609 1350 ntBASIC17.6■□□□□ 0.41
SMPD1P17405 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.6■□□□□ 0.41
SMPD1P17405 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.6■□□□□ 0.41
SMPD1P17405 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.6■□□□□ 0.41
SMPD1P17405 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
SMPD1P17405 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.6■□□□□ 0.41
SMPD1P17405 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SMPD1P17405 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SMPD1P17405 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SMPD1P17405 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMPD1P17405 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMPD1P17405 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SMPD1P17405 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SMPD1P17405 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms