Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HOXC6P09630 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
HOXC6P09630 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXC6P09630 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXC6P09630 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXC6P09630 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXC6P09630 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXC6P09630 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXC6P09630 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXC6P09630 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC6P09630 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HOXC6P09630 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HOXC6P09630 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXC6P09630 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HOXC6P09630 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HOXC6P09630 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXC6P09630 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.9■□□□□ 0.46
HOXC6P09630 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.9■□□□□ 0.46
HOXC6P09630 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.9■□□□□ 0.46
HOXC6P09630 MIR3615-201ENST00000581999 87 ntBASIC17.9■□□□□ 0.46
HOXC6P09630 AL450472.2-201ENST00000603663 1156 ntBASIC17.9■□□□□ 0.46
HOXC6P09630 AC097359.3-201ENST00000603982 1210 ntBASIC17.9■□□□□ 0.46
HOXC6P09630 AC068587.10-201ENST00000641210 219 ntBASIC17.9■□□□□ 0.46
HOXC6P09630 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXC6P09630 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.9■□□□□ 0.46
HOXC6P09630 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXC6P09630 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXC6P09630 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXC6P09630 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HOXC6P09630 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXC6P09630 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXC6P09630 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC6P09630 REXO1L1P-202ENST00000608646 1974 ntBASIC17.9■□□□□ 0.46
HOXC6P09630 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.89■□□□□ 0.46
HOXC6P09630 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
HOXC6P09630 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
HOXC6P09630 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
HOXC6P09630 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
HOXC6P09630 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC6P09630 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC6P09630 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC6P09630 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC6P09630 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
HOXC6P09630 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXC6P09630 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC6P09630 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXC6P09630 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXC6P09630 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXC6P09630 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC6P09630 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HOXC6P09630 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC6P09630 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXC6P09630 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HOXC6P09630 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC6P09630 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC6P09630 KRT18P43-201ENST00000469825 1281 ntBASIC17.89■□□□□ 0.45
HOXC6P09630 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC6P09630 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC6P09630 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC6P09630 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC6P09630 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC6P09630 RN7SL560P-201ENST00000577943 264 ntBASIC17.89■□□□□ 0.45
HOXC6P09630 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXC6P09630 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC6P09630 AC009542.2-202ENST00000619004 1067 ntBASIC17.89■□□□□ 0.45
HOXC6P09630 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXC6P09630 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXC6P09630 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXC6P09630 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HOXC6P09630 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HOXC6P09630 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXC6P09630 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC6P09630 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HOXC6P09630 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC6P09630 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC6P09630 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms