Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL1P09341 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL1P09341 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL1P09341 AP002414.1-201ENST00000391405 1147 ntBASIC12.47□□□□□ -0.41
CXCL1P09341 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL1P09341 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL1P09341 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.47□□□□□ -0.41
CXCL1P09341 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.47□□□□□ -0.41
CXCL1P09341 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.47□□□□□ -0.41
CXCL1P09341 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.47□□□□□ -0.41
CXCL1P09341 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL1P09341 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.47□□□□□ -0.41
CXCL1P09341 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.47□□□□□ -0.41
CXCL1P09341 AC090616.6-201ENST00000582640 721 ntBASIC12.47□□□□□ -0.41
CXCL1P09341 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.47□□□□□ -0.41
CXCL1P09341 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.47□□□□□ -0.41
CXCL1P09341 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CXCL1P09341 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.47□□□□□ -0.41
CXCL1P09341 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CXCL1P09341 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CXCL1P09341 SLC22A20-204ENST00000530038 1673 ntBASIC12.47□□□□□ -0.41
CXCL1P09341 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL1P09341 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL1P09341 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL1P09341 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CXCL1P09341 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.47□□□□□ -0.41
CXCL1P09341 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL1P09341 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL1P09341 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CXCL1P09341 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CXCL1P09341 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.46□□□□□ -0.41
CXCL1P09341 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
CXCL1P09341 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.46□□□□□ -0.41
CXCL1P09341 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CXCL1P09341 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.46□□□□□ -0.41
CXCL1P09341 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.46□□□□□ -0.41
CXCL1P09341 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.46□□□□□ -0.41
CXCL1P09341 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.41
CXCL1P09341 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.46□□□□□ -0.41
CXCL1P09341 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
CXCL1P09341 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.46□□□□□ -0.41
CXCL1P09341 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.46□□□□□ -0.41
CXCL1P09341 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.46□□□□□ -0.41
CXCL1P09341 AC010203.1-204ENST00000548782 407 ntBASIC12.46□□□□□ -0.41
CXCL1P09341 AC011840.4-201ENST00000578471 627 ntBASIC12.46□□□□□ -0.41
CXCL1P09341 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 AC011467.2-201ENST00000598425 242 ntBASIC12.46□□□□□ -0.41
CXCL1P09341 HYMAI.1-201ENST00000620949 238 ntBASIC12.46□□□□□ -0.41
CXCL1P09341 AC073592.5-201ENST00000624854 528 ntBASIC12.46□□□□□ -0.41
CXCL1P09341 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.46□□□□□ -0.41
CXCL1P09341 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CXCL1P09341 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CXCL1P09341 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.46□□□□□ -0.42
CXCL1P09341 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CXCL1P09341 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.46□□□□□ -0.42
CXCL1P09341 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CXCL1P09341 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CXCL1P09341 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CXCL1P09341 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.46□□□□□ -0.42
CXCL1P09341 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CXCL1P09341 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.42
CXCL1P09341 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CXCL1P09341 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CXCL1P09341 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CXCL1P09341 KRT8P49-201ENST00000604166 1432 ntBASIC12.45□□□□□ -0.42
CXCL1P09341 PPT1-213ENST00000641319 2388 ntBASIC12.45□□□□□ -0.42
CXCL1P09341 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.45□□□□□ -0.42
CXCL1P09341 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
CXCL1P09341 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CXCL1P09341 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CXCL1P09341 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CXCL1P09341 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CXCL1P09341 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CXCL1P09341 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CXCL1P09341 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CXCL1P09341 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.45□□□□□ -0.42
CXCL1P09341 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CXCL1P09341 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CXCL1P09341 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CXCL1P09341 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.45□□□□□ -0.42
CXCL1P09341 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.45□□□□□ -0.42
CXCL1P09341 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms