Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AL805961.1-202ENST00000641562 540 ntBASIC18.31■□□□□ 0.52
TPM2P07951 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM2P07951 TMBIM7P-203ENST00000641617 1718 ntBASIC18.31■□□□□ 0.52
TPM2P07951 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 AL353732.1-201ENST00000569618 1459 ntBASIC18.31■□□□□ 0.52
TPM2P07951 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TPM2P07951 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
TPM2P07951 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM2P07951 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC18.3■□□□□ 0.52
TPM2P07951 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM2P07951 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TPM2P07951 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM2P07951 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.3■□□□□ 0.52
TPM2P07951 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.3■□□□□ 0.52
TPM2P07951 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM2P07951 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.3■□□□□ 0.52
TPM2P07951 POU5F1P6-201ENST00000466990 990 ntBASIC18.3■□□□□ 0.52
TPM2P07951 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TPM2P07951 SART3-203ENST00000546611 1184 ntBASIC18.3■□□□□ 0.52
TPM2P07951 AC091304.2-201ENST00000564639 760 ntBASIC18.3■□□□□ 0.52
TPM2P07951 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM2P07951 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM2P07951 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.3■□□□□ 0.52
TPM2P07951 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM2P07951 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 SBF1P1-201ENST00000444527 5631 ntBASIC18.3■□□□□ 0.52
TPM2P07951 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TPM2P07951 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TPM2P07951 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.3■□□□□ 0.52
TPM2P07951 C1R-201ENST00000535233 2211 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM2P07951 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM2P07951 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TPM2P07951 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.3■□□□□ 0.52
TPM2P07951 SNX33P1-201ENST00000592116 1762 ntBASIC18.3■□□□□ 0.52
TPM2P07951 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM2P07951 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 LINC01144-201ENST00000626198 1710 ntBASIC18.29■□□□□ 0.52
TPM2P07951 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM2P07951 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM2P07951 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.29■□□□□ 0.52
TPM2P07951 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.29■□□□□ 0.52
TPM2P07951 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM2P07951 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.29■□□□□ 0.52
TPM2P07951 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.29■□□□□ 0.52
TPM2P07951 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.29■□□□□ 0.52
TPM2P07951 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.29■□□□□ 0.52
TPM2P07951 HCG4P8-203ENST00000443049 980 ntBASIC18.29■□□□□ 0.52
TPM2P07951 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
TPM2P07951 FGFR3P6-201ENST00000457012 610 ntBASIC18.29■□□□□ 0.52
TPM2P07951 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.29■□□□□ 0.52
TPM2P07951 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.29■□□□□ 0.52
TPM2P07951 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TPM2P07951 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.29■□□□□ 0.52
TPM2P07951 PRELID1P1-202ENST00000567272 903 ntBASIC18.29■□□□□ 0.52
TPM2P07951 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TPM2P07951 AL445228.2-201ENST00000605589 952 ntBASIC18.29■□□□□ 0.52
TPM2P07951 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM2P07951 GGTLC5P-201ENST00000617623 998 ntBASIC18.29■□□□□ 0.52
TPM2P07951 REXO1L3P-201ENST00000622202 1288 ntBASIC18.29■□□□□ 0.52
TPM2P07951 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM2P07951 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM2P07951 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM2P07951 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.29■□□□□ 0.52
TPM2P07951 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms