Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MROH4P-201ENST00000431302 1578 ntBASIC13.33□□□□□ -0.28
CTSDP07339 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.33□□□□□ -0.28
CTSDP07339 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CTSDP07339 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
CTSDP07339 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
CTSDP07339 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CTSDP07339 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.33□□□□□ -0.28
CTSDP07339 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 DUSP5P1-201ENST00000441325 1139 ntBASIC13.33□□□□□ -0.28
CTSDP07339 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CTSDP07339 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.33□□□□□ -0.28
CTSDP07339 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.33□□□□□ -0.28
CTSDP07339 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.33□□□□□ -0.28
CTSDP07339 AC025062.2-201ENST00000605477 670 ntBASIC13.33□□□□□ -0.28
CTSDP07339 AC008667.4-201ENST00000607370 168 ntBASIC13.33□□□□□ -0.28
CTSDP07339 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.33□□□□□ -0.28
CTSDP07339 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CTSDP07339 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CTSDP07339 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.33□□□□□ -0.28
CTSDP07339 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
CTSDP07339 AC232323.1-201ENST00000540724 2099 ntBASIC13.33□□□□□ -0.28
CTSDP07339 REXO1L5P-201ENST00000622260 2098 ntBASIC13.33□□□□□ -0.28
CTSDP07339 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
CTSDP07339 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.33□□□□□ -0.28
CTSDP07339 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.33□□□□□ -0.28
CTSDP07339 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.33□□□□□ -0.28
CTSDP07339 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CTSDP07339 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSDP07339 SNX18-202ENST00000343017 3140 ntBASIC13.33□□□□□ -0.28
CTSDP07339 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CTSDP07339 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CTSDP07339 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.32□□□□□ -0.28
CTSDP07339 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CTSDP07339 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.32□□□□□ -0.28
CTSDP07339 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.32□□□□□ -0.28
CTSDP07339 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CTSDP07339 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.32□□□□□ -0.28
CTSDP07339 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.32□□□□□ -0.28
CTSDP07339 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.32□□□□□ -0.28
CTSDP07339 MIR4321-201ENST00000592276 80 ntBASIC13.32□□□□□ -0.28
CTSDP07339 AC008608.2-201ENST00000606089 416 ntBASIC13.32□□□□□ -0.28
CTSDP07339 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.32□□□□□ -0.28
CTSDP07339 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.32□□□□□ -0.28
CTSDP07339 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.32□□□□□ -0.28
CTSDP07339 AC107918.4-202ENST00000641623 219 ntBASIC13.32□□□□□ -0.28
CTSDP07339 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
CTSDP07339 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CTSDP07339 GRK6P1-201ENST00000400595 1711 ntBASIC13.32□□□□□ -0.28
CTSDP07339 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CTSDP07339 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CTSDP07339 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CTSDP07339 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.32□□□□□ -0.28
CTSDP07339 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.32□□□□□ -0.28
CTSDP07339 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSDP07339 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms