Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA1P02708 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA1P02708 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA1P02708 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA1P02708 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CHRNA1P02708 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA1P02708 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHRNA1P02708 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA1P02708 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHRNA1P02708 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHRNA1P02708 ACTBP11-201ENST00000436287 1126 ntBASIC17.24■□□□□ 0.35
CHRNA1P02708 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CHRNA1P02708 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 AC007551.1-201ENST00000457394 519 ntBASIC17.24■□□□□ 0.35
CHRNA1P02708 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA1P02708 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA1P02708 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.24■□□□□ 0.35
CHRNA1P02708 AP000812.2-201ENST00000538934 718 ntBASIC17.24■□□□□ 0.35
CHRNA1P02708 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CHRNA1P02708 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA1P02708 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.24■□□□□ 0.35
CHRNA1P02708 AP001063.1-201ENST00000568332 529 ntBASIC17.24■□□□□ 0.35
CHRNA1P02708 AC009486.1-201ENST00000569860 813 ntBASIC17.24■□□□□ 0.35
CHRNA1P02708 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.24■□□□□ 0.35
CHRNA1P02708 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.24■□□□□ 0.35
CHRNA1P02708 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
CHRNA1P02708 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
CHRNA1P02708 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA1P02708 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHRNA1P02708 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CHRNA1P02708 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.24■□□□□ 0.35
CHRNA1P02708 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHRNA1P02708 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA1P02708 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 AC134312.5-201ENST00000568031 1313 ntBASIC17.23■□□□□ 0.35
CHRNA1P02708 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA1P02708 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA1P02708 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.23■□□□□ 0.35
CHRNA1P02708 AC012441.1-201ENST00000446669 685 ntBASIC17.23■□□□□ 0.35
CHRNA1P02708 AL355864.2-201ENST00000447420 863 ntBASIC17.23■□□□□ 0.35
CHRNA1P02708 FO681548.1-201ENST00000455617 1132 ntBASIC17.23■□□□□ 0.35
CHRNA1P02708 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 KRT18P43-201ENST00000469825 1281 ntBASIC17.23■□□□□ 0.35
CHRNA1P02708 FTH1P14-201ENST00000482930 551 ntBASIC17.23■□□□□ 0.35
CHRNA1P02708 AC026410.3-201ENST00000514280 936 ntBASIC17.23■□□□□ 0.35
CHRNA1P02708 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNA1P02708 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA1P02708 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA1P02708 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 MIR4525-201ENST00000580000 75 ntBASIC17.23■□□□□ 0.35
CHRNA1P02708 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CHRNA1P02708 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CHRNA1P02708 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA1P02708 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.23■□□□□ 0.35
CHRNA1P02708 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CHRNA1P02708 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms