Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.87■□□□□ 0.13
PDGFBP01127 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.87■□□□□ 0.13
PDGFBP01127 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PDGFBP01127 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.87■□□□□ 0.13
PDGFBP01127 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.87■□□□□ 0.13
PDGFBP01127 KRT18P43-201ENST00000469825 1281 ntBASIC15.87■□□□□ 0.13
PDGFBP01127 SERPINA13P-202ENST00000478994 924 ntBASIC15.87■□□□□ 0.13
PDGFBP01127 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.87■□□□□ 0.13
PDGFBP01127 NUP210P1-202ENST00000504322 710 ntBASIC15.87■□□□□ 0.13
PDGFBP01127 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.87■□□□□ 0.13
PDGFBP01127 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.87■□□□□ 0.13
PDGFBP01127 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
PDGFBP01127 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.87■□□□□ 0.13
PDGFBP01127 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.87■□□□□ 0.13
PDGFBP01127 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.87■□□□□ 0.13
PDGFBP01127 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PDGFBP01127 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.87■□□□□ 0.13
PDGFBP01127 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.87■□□□□ 0.13
PDGFBP01127 AC008132.1-202ENST00000342005 1389 ntBASIC15.87■□□□□ 0.13
PDGFBP01127 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFBP01127 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.86■□□□□ 0.13
PDGFBP01127 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.86■□□□□ 0.13
PDGFBP01127 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.86■□□□□ 0.13
PDGFBP01127 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PDGFBP01127 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PDGFBP01127 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PDGFBP01127 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.86■□□□□ 0.13
PDGFBP01127 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.86■□□□□ 0.13
PDGFBP01127 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
PDGFBP01127 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.86■□□□□ 0.13
PDGFBP01127 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PDGFBP01127 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.86■□□□□ 0.13
PDGFBP01127 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.86■□□□□ 0.13
PDGFBP01127 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.86■□□□□ 0.13
PDGFBP01127 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.86■□□□□ 0.13
PDGFBP01127 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.86■□□□□ 0.13
PDGFBP01127 AC015910.1-201ENST00000579400 975 ntBASIC15.86■□□□□ 0.13
PDGFBP01127 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.86■□□□□ 0.13
PDGFBP01127 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.86■□□□□ 0.13
PDGFBP01127 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PDGFBP01127 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.86■□□□□ 0.13
PDGFBP01127 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PDGFBP01127 TUBBP5-203ENST00000508529 1334 ntBASIC15.86■□□□□ 0.13
PDGFBP01127 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PDGFBP01127 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.86■□□□□ 0.13
PDGFBP01127 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFBP01127 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.86■□□□□ 0.13
PDGFBP01127 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.85■□□□□ 0.13
PDGFBP01127 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.85■□□□□ 0.13
PDGFBP01127 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.85■□□□□ 0.13
PDGFBP01127 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.85■□□□□ 0.13
PDGFBP01127 CD8B2-202ENST00000417670 633 ntBASIC15.85■□□□□ 0.13
PDGFBP01127 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.85■□□□□ 0.13
PDGFBP01127 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.85■□□□□ 0.13
PDGFBP01127 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.85■□□□□ 0.13
PDGFBP01127 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms