Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.45□□□□□ -0.26
SIX6O95475 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
SIX6O95475 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.45□□□□□ -0.26
SIX6O95475 SLC25A3P1-201ENST00000443844 931 ntBASIC13.45□□□□□ -0.26
SIX6O95475 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.45□□□□□ -0.26
SIX6O95475 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.45□□□□□ -0.26
SIX6O95475 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.45□□□□□ -0.26
SIX6O95475 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SIX6O95475 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.45□□□□□ -0.26
SIX6O95475 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SIX6O95475 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
SIX6O95475 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SIX6O95475 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 AC148477.4-201ENST00000613430 1793 ntBASIC13.45□□□□□ -0.26
SIX6O95475 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 PMPCAP1-201ENST00000508114 1576 ntBASIC13.45□□□□□ -0.26
SIX6O95475 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SIX6O95475 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SIX6O95475 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
SIX6O95475 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.44□□□□□ -0.26
SIX6O95475 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.44□□□□□ -0.26
SIX6O95475 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
SIX6O95475 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.44□□□□□ -0.26
SIX6O95475 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.44□□□□□ -0.26
SIX6O95475 AC098590.1-201ENST00000468126 897 ntBASIC13.44□□□□□ -0.26
SIX6O95475 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.44□□□□□ -0.26
SIX6O95475 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
SIX6O95475 AC011840.4-201ENST00000578471 627 ntBASIC13.44□□□□□ -0.26
SIX6O95475 CYP2A7P1-201ENST00000595391 815 ntBASIC13.44□□□□□ -0.26
SIX6O95475 AL592071.1-201ENST00000611956 408 ntBASIC13.44□□□□□ -0.26
SIX6O95475 AC020765.3-201ENST00000613051 740 ntBASIC13.44□□□□□ -0.26
SIX6O95475 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SIX6O95475 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.44□□□□□ -0.26
SIX6O95475 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SIX6O95475 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
SIX6O95475 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms