Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.02□□□□□ -0.49
SH2D1AO60880 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SH2D1AO60880 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SH2D1AO60880 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SH2D1AO60880 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SH2D1AO60880 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SH2D1AO60880 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.02□□□□□ -0.49
SH2D1AO60880 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SH2D1AO60880 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SH2D1AO60880 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SH2D1AO60880 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SH2D1AO60880 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SH2D1AO60880 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.02□□□□□ -0.49
SH2D1AO60880 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SH2D1AO60880 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SH2D1AO60880 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.02□□□□□ -0.49
SH2D1AO60880 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SH2D1AO60880 AC007292.2-201ENST00000593524 1812 ntBASIC12.02□□□□□ -0.49
SH2D1AO60880 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.02□□□□□ -0.49
SH2D1AO60880 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.02□□□□□ -0.49
SH2D1AO60880 LINC01101-201ENST00000622953 1884 ntBASIC12.02□□□□□ -0.49
SH2D1AO60880 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
SH2D1AO60880 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.02□□□□□ -0.49
SH2D1AO60880 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SH2D1AO60880 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SH2D1AO60880 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 C18orf15-201ENST00000623680 2534 ntBASIC12.01□□□□□ -0.49
SH2D1AO60880 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.01□□□□□ -0.49
SH2D1AO60880 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SH2D1AO60880 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
SH2D1AO60880 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SH2D1AO60880 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.01□□□□□ -0.49
SH2D1AO60880 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 AC093724.1-201ENST00000448659 1027 ntBASIC12.01□□□□□ -0.49
SH2D1AO60880 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
SH2D1AO60880 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 MIR4515-201ENST00000584082 81 ntBASIC12.01□□□□□ -0.49
SH2D1AO60880 AL365330.1-201ENST00000607459 531 ntBASIC12.01□□□□□ -0.49
SH2D1AO60880 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.01□□□□□ -0.49
SH2D1AO60880 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.01□□□□□ -0.49
SH2D1AO60880 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 AC091951.1-201ENST00000512854 2465 ntBASIC12.01□□□□□ -0.49
SH2D1AO60880 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 AC112693.3-201ENST00000624819 1983 ntBASIC12.01□□□□□ -0.49
SH2D1AO60880 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SH2D1AO60880 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
SH2D1AO60880 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
SH2D1AO60880 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.01□□□□□ -0.49
SH2D1AO60880 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SH2D1AO60880 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SH2D1AO60880 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SH2D1AO60880 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12□□□□□ -0.49
SH2D1AO60880 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SH2D1AO60880 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SH2D1AO60880 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SH2D1AO60880 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12□□□□□ -0.49
SH2D1AO60880 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12□□□□□ -0.49
SH2D1AO60880 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SH2D1AO60880 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SH2D1AO60880 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
SH2D1AO60880 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SH2D1AO60880 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12□□□□□ -0.49
SH2D1AO60880 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
SH2D1AO60880 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12□□□□□ -0.49
SH2D1AO60880 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms