Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
KDELR3O43731 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
KDELR3O43731 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.16■□□□□ 0.18
KDELR3O43731 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
KDELR3O43731 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
KDELR3O43731 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
KDELR3O43731 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.16■□□□□ 0.18
KDELR3O43731 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 MIR661-201ENST00000384842 89 ntBASIC16.16■□□□□ 0.18
KDELR3O43731 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.16■□□□□ 0.18
KDELR3O43731 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.16■□□□□ 0.18
KDELR3O43731 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.16■□□□□ 0.18
KDELR3O43731 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.16■□□□□ 0.18
KDELR3O43731 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.16■□□□□ 0.18
KDELR3O43731 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.16■□□□□ 0.18
KDELR3O43731 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.16■□□□□ 0.18
KDELR3O43731 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.16■□□□□ 0.18
KDELR3O43731 RN7SL204P-201ENST00000582831 262 ntBASIC16.16■□□□□ 0.18
KDELR3O43731 AC009118.2-201ENST00000613275 655 ntBASIC16.16■□□□□ 0.18
KDELR3O43731 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.16■□□□□ 0.18
KDELR3O43731 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
KDELR3O43731 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.16■□□□□ 0.18
KDELR3O43731 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.16■□□□□ 0.18
KDELR3O43731 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.16■□□□□ 0.18
KDELR3O43731 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KDELR3O43731 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 AP005117.1-202ENST00000581724 1908 ntBASIC16.15■□□□□ 0.18
KDELR3O43731 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.15■□□□□ 0.18
KDELR3O43731 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.15■□□□□ 0.18
KDELR3O43731 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
KDELR3O43731 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.15■□□□□ 0.18
KDELR3O43731 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.15■□□□□ 0.18
KDELR3O43731 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
KDELR3O43731 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
KDELR3O43731 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KDELR3O43731 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.15■□□□□ 0.18
KDELR3O43731 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
KDELR3O43731 RPL13P2-201ENST00000440687 659 ntBASIC16.15■□□□□ 0.18
KDELR3O43731 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.15■□□□□ 0.18
KDELR3O43731 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
KDELR3O43731 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.15■□□□□ 0.18
KDELR3O43731 SERBP1P5-201ENST00000510079 1181 ntBASIC16.15■□□□□ 0.18
KDELR3O43731 AC092337.1-201ENST00000568699 1129 ntBASIC16.15■□□□□ 0.18
KDELR3O43731 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.15■□□□□ 0.18
KDELR3O43731 LINC02560-201ENST00000596379 459 ntBASIC16.15■□□□□ 0.18
KDELR3O43731 LINC01115-203ENST00000606068 577 ntBASIC16.15■□□□□ 0.18
KDELR3O43731 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.15■□□□□ 0.18
KDELR3O43731 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.15■□□□□ 0.18
KDELR3O43731 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.15■□□□□ 0.18
KDELR3O43731 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.15■□□□□ 0.18
KDELR3O43731 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
KDELR3O43731 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.15■□□□□ 0.18
KDELR3O43731 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
KDELR3O43731 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.15■□□□□ 0.18
KDELR3O43731 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.15■□□□□ 0.18
KDELR3O43731 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KDELR3O43731 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
KDELR3O43731 AC022188.1-201ENST00000620960 1664 ntBASIC16.14■□□□□ 0.18
KDELR3O43731 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
KDELR3O43731 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
KDELR3O43731 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KDELR3O43731 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KDELR3O43731 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
KDELR3O43731 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
KDELR3O43731 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KDELR3O43731 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.14■□□□□ 0.17
KDELR3O43731 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms