Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS4O43181 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS4O43181 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS4O43181 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NDUFS4O43181 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NDUFS4O43181 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFS4O43181 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFS4O43181 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFS4O43181 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
NDUFS4O43181 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NDUFS4O43181 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.32■□□□□ 0.04
NDUFS4O43181 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.32■□□□□ 0.04
NDUFS4O43181 AC069120.2-201ENST00000524091 540 ntBASIC15.32■□□□□ 0.04
NDUFS4O43181 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NDUFS4O43181 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFS4O43181 AC140878.1-201ENST00000565277 250 ntBASIC15.32■□□□□ 0.04
NDUFS4O43181 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.32■□□□□ 0.04
NDUFS4O43181 AL133215.2-201ENST00000609242 977 ntBASIC15.32■□□□□ 0.04
NDUFS4O43181 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NDUFS4O43181 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFS4O43181 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFS4O43181 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFS4O43181 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFS4O43181 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFS4O43181 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFS4O43181 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFS4O43181 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
NDUFS4O43181 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFS4O43181 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS4O43181 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NDUFS4O43181 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFS4O43181 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
NDUFS4O43181 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 PRAL-201ENST00000624952 3286 ntBASIC15.31■□□□□ 0.04
NDUFS4O43181 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NDUFS4O43181 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.31■□□□□ 0.04
NDUFS4O43181 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.31■□□□□ 0.04
NDUFS4O43181 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NDUFS4O43181 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
NDUFS4O43181 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.31■□□□□ 0.04
NDUFS4O43181 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
NDUFS4O43181 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.31■□□□□ 0.04
NDUFS4O43181 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFS4O43181 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.31■□□□□ 0.04
NDUFS4O43181 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.31■□□□□ 0.04
NDUFS4O43181 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFS4O43181 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.31■□□□□ 0.04
NDUFS4O43181 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFS4O43181 SPDYE12P-201ENST00000618416 771 ntBASIC15.31■□□□□ 0.04
NDUFS4O43181 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFS4O43181 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFS4O43181 PAUPAR-201ENST00000630360 2965 ntBASIC15.31■□□□□ 0.04
NDUFS4O43181 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFS4O43181 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFS4O43181 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS4O43181 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NDUFS4O43181 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NDUFS4O43181 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms