Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
ABCC4O15439 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ABCC4O15439 FO393414.2-201ENST00000405153 598 ntBASIC20.2■□□□□ 0.82
ABCC4O15439 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC20.2■□□□□ 0.82
ABCC4O15439 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ABCC4O15439 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ABCC4O15439 SRD5A3P1-201ENST00000603021 949 ntBASIC20.2■□□□□ 0.82
ABCC4O15439 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ABCC4O15439 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ABCC4O15439 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ABCC4O15439 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.19■□□□□ 0.82
ABCC4O15439 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.19■□□□□ 0.82
ABCC4O15439 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC20.19■□□□□ 0.82
ABCC4O15439 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ABCC4O15439 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
ABCC4O15439 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.19■□□□□ 0.82
ABCC4O15439 AL589987.1-201ENST00000453380 819 ntBASIC20.19■□□□□ 0.82
ABCC4O15439 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.19■□□□□ 0.82
ABCC4O15439 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ABCC4O15439 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.19■□□□□ 0.82
ABCC4O15439 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.19■□□□□ 0.82
ABCC4O15439 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
ABCC4O15439 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.19■□□□□ 0.82
ABCC4O15439 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.19■□□□□ 0.82
ABCC4O15439 AC004461.2-201ENST00000629517 803 ntBASIC20.19■□□□□ 0.82
ABCC4O15439 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.19■□□□□ 0.82
ABCC4O15439 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ABCC4O15439 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.19■□□□□ 0.82
ABCC4O15439 AC105917.1-201ENST00000506637 2539 ntBASIC20.18■□□□□ 0.82
ABCC4O15439 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.18■□□□□ 0.82
ABCC4O15439 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ABCC4O15439 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.18■□□□□ 0.82
ABCC4O15439 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.18■□□□□ 0.82
ABCC4O15439 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
ABCC4O15439 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 AC074338.1-201ENST00000416825 156 ntBASIC20.18■□□□□ 0.82
ABCC4O15439 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.18■□□□□ 0.82
ABCC4O15439 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.18■□□□□ 0.82
ABCC4O15439 AC055876.2-201ENST00000531834 546 ntBASIC20.18■□□□□ 0.82
ABCC4O15439 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.18■□□□□ 0.82
ABCC4O15439 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
ABCC4O15439 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.18■□□□□ 0.82
ABCC4O15439 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ABCC4O15439 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCC4O15439 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCC4O15439 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.17■□□□□ 0.82
ABCC4O15439 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
ABCC4O15439 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ABCC4O15439 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.17■□□□□ 0.82
ABCC4O15439 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCC4O15439 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.17■□□□□ 0.82
ABCC4O15439 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.17■□□□□ 0.82
ABCC4O15439 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ABCC4O15439 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCC4O15439 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.17■□□□□ 0.82
ABCC4O15439 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCC4O15439 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCC4O15439 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ABCC4O15439 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ABCC4O15439 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms