Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
PCDH17O14917 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH17O14917 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDH17O14917 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDH17O14917 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH17O14917 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PCDH17O14917 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH17O14917 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH17O14917 MIR943-201ENST00000401286 94 ntBASIC15.33■□□□□ 0.04
PCDH17O14917 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH17O14917 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDH17O14917 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDH17O14917 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDH17O14917 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDH17O14917 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.33■□□□□ 0.04
PCDH17O14917 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.33■□□□□ 0.04
PCDH17O14917 AL390955.2-201ENST00000603032 514 ntBASIC15.33■□□□□ 0.04
PCDH17O14917 AC239800.4-201ENST00000603712 296 ntBASIC15.33■□□□□ 0.04
PCDH17O14917 AC026979.3-201ENST00000607315 403 ntBASIC15.33■□□□□ 0.04
PCDH17O14917 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.33■□□□□ 0.04
PCDH17O14917 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDH17O14917 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
PCDH17O14917 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PCDH17O14917 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH17O14917 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDH17O14917 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH17O14917 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
PCDH17O14917 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH17O14917 REXO1L8P-201ENST00000604378 1897 ntBASIC15.33■□□□□ 0.04
PCDH17O14917 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH17O14917 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH17O14917 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PCDH17O14917 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH17O14917 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDH17O14917 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH17O14917 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PCDH17O14917 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDH17O14917 AC144831.1-201ENST00000573312 2656 ntBASIC15.32■□□□□ 0.04
PCDH17O14917 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDH17O14917 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 DBET-201ENST00000630918 3363 ntBASIC15.32■□□□□ 0.04
PCDH17O14917 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDH17O14917 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDH17O14917 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH17O14917 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH17O14917 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.32■□□□□ 0.04
PCDH17O14917 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH17O14917 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.32■□□□□ 0.04
PCDH17O14917 DUX4L27-201ENST00000554796 1261 ntBASIC15.32■□□□□ 0.04
PCDH17O14917 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDH17O14917 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDH17O14917 AC138761.1-201ENST00000584393 385 ntBASIC15.32■□□□□ 0.04
PCDH17O14917 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
PCDH17O14917 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDH17O14917 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH17O14917 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH17O14917 FOXO1B-201ENST00000504678 1527 ntBASIC15.32■□□□□ 0.04
PCDH17O14917 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDH17O14917 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH17O14917 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH17O14917 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDH17O14917 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCDH17O14917 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDH17O14917 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.31■□□□□ 0.04
PCDH17O14917 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 HLA-V-204ENST00000476601 1289 ntBASIC15.31■□□□□ 0.04
PCDH17O14917 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH17O14917 MIR4453-201ENST00000584019 89 ntBASIC15.31■□□□□ 0.04
PCDH17O14917 AL365330.1-201ENST00000607459 531 ntBASIC15.31■□□□□ 0.04
PCDH17O14917 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH17O14917 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDH17O14917 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms