Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CLIC1O00299 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.12■□□□□ 0.01
CLIC1O00299 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
CLIC1O00299 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.12■□□□□ 0.01
CLIC1O00299 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.12■□□□□ 0.01
CLIC1O00299 AL662844.1-201ENST00000546340 181 ntBASIC15.12■□□□□ 0.01
CLIC1O00299 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.12■□□□□ 0.01
CLIC1O00299 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.12■□□□□ 0.01
CLIC1O00299 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 AC064836.3-201ENST00000607928 673 ntBASIC15.12■□□□□ 0.01
CLIC1O00299 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLIC1O00299 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.12■□□□□ 0.01
CLIC1O00299 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.12■□□□□ 0.01
CLIC1O00299 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CLIC1O00299 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.12■□□□□ 0.01
CLIC1O00299 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLIC1O00299 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.12■□□□□ 0.01
CLIC1O00299 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLIC1O00299 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.12■□□□□ 0.01
CLIC1O00299 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLIC1O00299 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.11■□□□□ 0.01
CLIC1O00299 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.11■□□□□ 0.01
CLIC1O00299 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
CLIC1O00299 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.11■□□□□ 0.01
CLIC1O00299 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.11■□□□□ 0.01
CLIC1O00299 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.11■□□□□ 0.01
CLIC1O00299 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.11■□□□□ 0.01
CLIC1O00299 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.11■□□□□ 0.01
CLIC1O00299 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.11■□□□□ 0.01
CLIC1O00299 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.11■□□□□ 0.01
CLIC1O00299 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.11■□□□□ 0.01
CLIC1O00299 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CLIC1O00299 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.11■□□□□ 0.01
CLIC1O00299 SLC25A6P4-201ENST00000586535 553 ntBASIC15.11■□□□□ 0.01
CLIC1O00299 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.11■□□□□ 0.01
CLIC1O00299 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.11■□□□□ 0.01
CLIC1O00299 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.11■□□□□ 0.01
CLIC1O00299 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.11■□□□□ 0.01
CLIC1O00299 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CLIC1O00299 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.11■□□□□ 0.01
CLIC1O00299 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CLIC1O00299 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.11■□□□□ 0.01
CLIC1O00299 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CLIC1O00299 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.11■□□□□ 0.01
CLIC1O00299 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLIC1O00299 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLIC1O00299 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.11■□□□□ 0.01
CLIC1O00299 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLIC1O00299 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLIC1O00299 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLIC1O00299 LINC02228-204ENST00000642115 2962 ntBASIC15.1■□□□□ 0.01
CLIC1O00299 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.1■□□□□ 0.01
CLIC1O00299 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLIC1O00299 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLIC1O00299 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms