Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 AC091951.1-201ENST00000512854 2465 ntBASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM49D1C9J1S8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 C18orf15-201ENST00000623680 2534 ntBASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 RHOQP3-201ENST00000437982 621 ntBASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 AC009947.1-201ENST00000444350 727 ntBASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 AC096734.2-201ENST00000562054 433 ntBASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 MIR7706-201ENST00000613747 67 ntBASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 CICP24-201ENST00000605464 2705 ntBASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM49D1C9J1S8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 UNC93B6-202ENST00000528242 690 ntBASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRIM49D1C9J1S8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms