Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 NDUFS6P1-201ENST00000485187 316 ntBASIC19.66■□□□□ 0.74
RGPD3A6NKT7 HLA-J-204ENST00000495278 958 ntBASIC19.66■□□□□ 0.74
RGPD3A6NKT7 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 MIR3677-201ENST00000578964 60 ntBASIC19.66■□□□□ 0.74
RGPD3A6NKT7 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 AC009084.3-201ENST00000623356 437 ntBASIC19.66■□□□□ 0.74
RGPD3A6NKT7 AL162426.1-201ENST00000624141 743 ntBASIC19.66■□□□□ 0.74
RGPD3A6NKT7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RGPD3A6NKT7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 SERF2-206ENST00000409291 807 ntTSL 3 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 RPS9P1-201ENST00000419943 583 ntBASIC19.65■□□□□ 0.74
RGPD3A6NKT7 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 AP002803.1-201ENST00000528836 498 ntBASIC19.65■□□□□ 0.74
RGPD3A6NKT7 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 AC138466.3-201ENST00000619983 221 ntBASIC19.65■□□□□ 0.74
RGPD3A6NKT7 AL645728.2-202ENST00000641679 227 ntBASIC19.65■□□□□ 0.74
RGPD3A6NKT7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RGPD3A6NKT7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.74
RGPD3A6NKT7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RGPD3A6NKT7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RGPD3A6NKT7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 AL158070.2-201ENST00000623713 1621 ntBASIC19.64■□□□□ 0.73
RGPD3A6NKT7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 AC022188.1-201ENST00000620960 1664 ntBASIC19.64■□□□□ 0.73
RGPD3A6NKT7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 AL157792.1-201ENST00000488281 530 ntBASIC19.64■□□□□ 0.73
RGPD3A6NKT7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 AL358472.3-201ENST00000608147 415 ntBASIC19.64■□□□□ 0.73
RGPD3A6NKT7 MEG3_2.1-201ENST00000611456 105 ntBASIC19.64■□□□□ 0.73
RGPD3A6NKT7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RGPD3A6NKT7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 NOC2LP2-201ENST00000407594 1944 ntBASIC19.63■□□□□ 0.73
RGPD3A6NKT7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 TPM1-223ENST00000560445 485 ntTSL 3 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 AC127024.7-201ENST00000625101 200 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms