Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN8A6NHC0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.29■□□□□ 0.2
CAPN8A6NHC0 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.29■□□□□ 0.2
CAPN8A6NHC0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 CNN2P2-201ENST00000443536 909 ntBASIC16.29■□□□□ 0.2
CAPN8A6NHC0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 CNN2P3-201ENST00000450201 906 ntBASIC16.29■□□□□ 0.2
CAPN8A6NHC0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 CR383656.12-201ENST00000549567 513 ntBASIC16.29■□□□□ 0.2
CAPN8A6NHC0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 AC005498.2-205ENST00000593218 784 ntBASIC16.29■□□□□ 0.2
CAPN8A6NHC0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 AL136317.3-201ENST00000618497 906 ntBASIC16.29■□□□□ 0.2
CAPN8A6NHC0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN8A6NHC0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 AL353705.2-201ENST00000428243 662 ntBASIC16.28■□□□□ 0.2
CAPN8A6NHC0 BASP1P1-201ENST00000430708 665 ntBASIC16.28■□□□□ 0.2
CAPN8A6NHC0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN8A6NHC0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN8A6NHC0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN8A6NHC0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms