Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 AL645939.2-201ENST00000427340 991 ntBASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 KRT18P34-201ENST00000488218 1270 ntBASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 IGHV3-65-201ENST00000523210 341 ntBASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 AC025062.2-201ENST00000605477 670 ntBASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 AC008608.2-201ENST00000606089 416 ntBASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DUXBA0A1W2PPF3 AC092127.1-201ENST00000567093 3455 ntBASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 MRPL20P1-201ENST00000400819 433 ntBASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 AL031432.2-201ENST00000566714 459 ntBASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 AL928711.1-201ENST00000570165 459 ntBASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUXBA0A1W2PPF3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
DUXBA0A1W2PPF3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
DUXBA0A1W2PPF3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
DUXBA0A1W2PPF3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUXBA0A1W2PPF3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DUXBA0A1W2PPF3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUXBA0A1W2PPF3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
DUXBA0A1W2PPF3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms