Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 MAPK10-262ENST00000641051 5738 ntBASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 AL353732.1-201ENST00000569618 1459 ntBASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
LINC01558Q9Y6Z2 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 NME2-201ENST00000393183 568 ntTSL 2 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 AL023284.2-201ENST00000405850 579 ntBASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 Z85996.1-201ENST00000494644 937 ntBASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 AC013467.2-201ENST00000605472 835 ntBASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 MPST-208ENST00000628507 698 ntTSL 5 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 RASSF1-AS1-201ENST00000629828 790 ntBASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 MTHFR-210ENST00000641407 2387 ntBASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 AL021920.2-201ENST00000624828 1351 ntBASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
LINC01558Q9Y6Z2 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 HOXB1-202ENST00000577092 1414 ntBASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 GOLGA2P5-201ENST00000266746 2395 ntBASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 AC102953.2-201ENST00000609755 3026 ntBASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC8.2□□□□□ -1.1
LINC01558Q9Y6Z2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms