Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 KRT8P23-201ENST00000560090 1207 ntBASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCDHGA11Q9Y5H2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 AC011477.6-201ENST00000604980 1927 ntBASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 MIR346-201ENST00000362234 95 ntBASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 HCG24-202ENST00000414398 717 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 AC142381.1-201ENST00000426099 345 ntBASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 HTR5BP-201ENST00000430851 1154 ntBASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 IGHV3-62-201ENST00000520057 340 ntBASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 FOXO1B-201ENST00000504678 1527 ntBASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA11Q9Y5H2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 FAM220BP-201ENST00000377689 816 ntBASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 SPCS2P4-201ENST00000436160 681 ntBASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 DNAJB3-201ENST00000446806 729 ntBASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 AC079140.1-201ENST00000508039 487 ntBASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 KRT8P48-201ENST00000515599 1220 ntBASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms