Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 AZGP1P1-201ENST00000411909 902 ntBASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 TSSK5P-201ENST00000423978 907 ntBASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 AL033527.5-202ENST00000641632 1098 ntBASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 AL365203.3-201ENST00000609742 2057 ntBASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 BASP1P1-201ENST00000430708 665 ntBASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 EEF1DP4-201ENST00000446006 880 ntBASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 AL512361.1-201ENST00000554200 418 ntBASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 AC087499.5-201ENST00000452760 1342 ntBASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGC4Q9Y5F7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGC4Q9Y5F7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC4Q9Y5F7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGC4Q9Y5F7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms