Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AC140878.1-201ENST00000565277 250 ntBASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AC051619.7-201ENST00000568314 623 ntBASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AL589739.1-201ENST00000607720 493 ntBASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AC010491.1-201ENST00000563101 2797 ntBASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDGFL3Q9Y3E1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 REXO1L1P-202ENST00000608646 1974 ntBASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 LINC02199-201ENST00000506655 2702 ntBASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 KRT8P12-202ENST00000472924 1397 ntBASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 AC107890.1-201ENST00000422478 521 ntBASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 HLA-V-204ENST00000476601 1289 ntBASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 AL079307.3-201ENST00000556114 283 ntBASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDGFL3Q9Y3E1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 AC092183.1-201ENST00000469884 875 ntBASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 AC069120.2-201ENST00000524091 540 ntBASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HDGFL3Q9Y3E1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms