Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 CICP8-201ENST00000455800 2813 ntBASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 AC068472.1-201ENST00000474589 881 ntBASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 STK19B-204ENST00000512515 211 ntBASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
LRCH1Q9Y2L9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 MIR662-201ENST00000384847 95 ntBASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 AC103564.2-201ENST00000432853 1299 ntBASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 AC122714.2-201ENST00000502787 707 ntBASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 AC027601.5-201ENST00000624065 2482 ntBASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.29■□□□□ 0.04
LRCH1Q9Y2L9 SLC22A20-204ENST00000530038 1673 ntBASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 DGCR9-201ENST00000609630 2415 ntBASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 KRT8P39-201ENST00000396270 1433 ntBASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 BX640514.1-201ENST00000583223 1918 ntBASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 AL121672.3-201ENST00000608644 468 ntBASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 AC093458.2-201ENST00000623150 629 ntBASIC15.28■□□□□ 0.04
LRCH1Q9Y2L9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms