Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 AC105339.1-204ENST00000636249 355 ntBASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS9D1Q9Y2B5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 RPS8P6-201ENST00000426177 609 ntBASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 AC069335.1-201ENST00000489972 472 ntBASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 AC134407.2-201ENST00000625089 1978 ntBASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS9D1Q9Y2B5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 AC005237.2-201ENST00000434368 219 ntBASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 AP000344.2-201ENST00000512987 629 ntBASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 SLC25A39P2-201ENST00000537614 270 ntBASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms