Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC6Q9UBN7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 AC138969.3-201ENST00000546612 1459 ntBASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 AC138932.2-201ENST00000548268 1459 ntBASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 AC126755.4-201ENST00000549796 1459 ntBASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 SPDYE19P-201ENST00000338590 713 ntBASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 SPDYE18-201ENST00000510091 1050 ntBASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HDAC6Q9UBN7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 DGCR5-201ENST00000399539 862 ntBASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 DFFBP1-201ENST00000433250 979 ntBASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 DOC2GP-202ENST00000514950 1163 ntBASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 CHCHD2P3-201ENST00000603038 451 ntBASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 GGT4P-201ENST00000623672 1708 ntBASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms