Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC090616.6-203ENST00000579186 1945 ntBASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AC092384.3-202ENST00000564646 2873 ntBASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AC074338.1-201ENST00000416825 156 ntBASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AC107890.1-201ENST00000422478 521 ntBASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AC092183.1-201ENST00000469884 875 ntBASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AL512361.1-201ENST00000554200 418 ntBASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AC073592.8-201ENST00000624126 511 ntBASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AL033527.5-202ENST00000641632 1098 ntBASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AC136621.1-201ENST00000624017 2304 ntBASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 SSR4P1-203ENST00000599569 2260 ntBASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 TARDBPP1-201ENST00000442013 1203 ntBASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 AC097493.3-201ENST00000509725 367 ntBASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 AC069120.2-201ENST00000524091 540 ntBASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 DUX4L27-201ENST00000554796 1261 ntBASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 PPT1-215ENST00000641471 2368 ntBASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BLOC1S4Q9NUP1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 TREML5P-201ENST00000421694 576 ntBASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 AC067863.1-201ENST00000494933 530 ntBASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BLOC1S4Q9NUP1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms