Protein–RNA interactions for Protein: Q9HCM2

PLXNA4, Plexin-A4, humanhuman

Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4Q9HCM2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PLXNA4Q9HCM2 AC018892.3-201ENST00000623986 2499 ntBASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 AL138709.1-201ENST00000614840 1693 ntBASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.6■□□□□ 0.25
PLXNA4Q9HCM2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 BTBD6P1-201ENST00000412176 1267 ntBASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 KRT18P25-201ENST00000508931 1278 ntBASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 MIR4741-201ENST00000579822 90 ntBASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.59■□□□□ 0.25
PLXNA4Q9HCM2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.58■□□□□ 0.25
PLXNA4Q9HCM2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PLXNA4Q9HCM2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PLXNA4Q9HCM2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PLXNA4Q9HCM2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PLXNA4Q9HCM2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.58■□□□□ 0.25
PLXNA4Q9HCM2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PLXNA4Q9HCM2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PLXNA4Q9HCM2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PLXNA4Q9HCM2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms