Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR2J3Q9H1A7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 AC145285.3-201ENST00000564603 959 ntBASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
POLR2J3Q9H1A7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 CICP13-201ENST00000422015 2789 ntBASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR2J3Q9H1A7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms