Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AKR7A2P1-201ENST00000460134 915 ntBASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 FAM86HP-204ENST00000513466 959 ntBASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 AC105129.2-201ENST00000559536 390 ntBASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 MIR4706-201ENST00000582134 82 ntBASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 RHOXF1P1-202ENST00000635473 501 ntBASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBE2OQ9C0C9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 ENPP7P5-201ENST00000541031 1031 ntBASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 AL607033.1-201ENST00000623900 1599 ntBASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 OR6D1P-203ENST00000641209 4860 ntBASIC17.6■□□□□ 0.41
UBE2OQ9C0C9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 AC103702.1-201ENST00000548801 2630 ntBASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 AD000864.1-201ENST00000624076 2295 ntBASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 PCDH8P1-201ENST00000428983 2773 ntBASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
UBE2OQ9C0C9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBE2OQ9C0C9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBE2OQ9C0C9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.58■□□□□ 0.41
UBE2OQ9C0C9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBE2OQ9C0C9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms