Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ABCA3Q99758 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ABCA3Q99758 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ABCA3Q99758 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC20.74■□□□□ 0.91
ABCA3Q99758 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCA3Q99758 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
ABCA3Q99758 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
ABCA3Q99758 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCA3Q99758 ME2P1-201ENST00000426028 1970 ntBASIC20.74■□□□□ 0.91
ABCA3Q99758 MFF-204ENST00000353339 2186 ntTSL 5 BASIC20.74■□□□□ 0.91
ABCA3Q99758 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCA3Q99758 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCA3Q99758 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCA3Q99758 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCA3Q99758 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCA3Q99758 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.73■□□□□ 0.91
ABCA3Q99758 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC20.73■□□□□ 0.91
ABCA3Q99758 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.73■□□□□ 0.91
ABCA3Q99758 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.73■□□□□ 0.91
ABCA3Q99758 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 AL160314.3-201ENST00000556041 767 ntBASIC20.73■□□□□ 0.91
ABCA3Q99758 AL161670.2-201ENST00000557650 1227 ntBASIC20.73■□□□□ 0.91
ABCA3Q99758 MIR4750-201ENST00000584564 56 ntBASIC20.73■□□□□ 0.91
ABCA3Q99758 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
ABCA3Q99758 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA3Q99758 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC20.73■□□□□ 0.91
ABCA3Q99758 CHMP1AP1-201ENST00000445563 662 ntBASIC20.73■□□□□ 0.91
ABCA3Q99758 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC20.73■□□□□ 0.91
ABCA3Q99758 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC20.73■□□□□ 0.91
ABCA3Q99758 RN7SL736P-201ENST00000613111 269 ntBASIC20.73■□□□□ 0.91
ABCA3Q99758 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCA3Q99758 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCA3Q99758 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.72■□□□□ 0.91
ABCA3Q99758 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCA3Q99758 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ABCA3Q99758 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.72■□□□□ 0.91
ABCA3Q99758 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ABCA3Q99758 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
ABCA3Q99758 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCA3Q99758 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ABCA3Q99758 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ABCA3Q99758 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCA3Q99758 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCA3Q99758 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ABCA3Q99758 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC20.72■□□□□ 0.91
ABCA3Q99758 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC20.72■□□□□ 0.91
ABCA3Q99758 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ABCA3Q99758 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ABCA3Q99758 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCA3Q99758 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ABCA3Q99758 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
ABCA3Q99758 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.71■□□□□ 0.91
ABCA3Q99758 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC20.71■□□□□ 0.91
ABCA3Q99758 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.71■□□□□ 0.91
ABCA3Q99758 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC20.71■□□□□ 0.91
ABCA3Q99758 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC20.71■□□□□ 0.91
ABCA3Q99758 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.71■□□□□ 0.91
ABCA3Q99758 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ABCA3Q99758 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 AL158070.2-201ENST00000623713 1621 ntBASIC20.71■□□□□ 0.91
ABCA3Q99758 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.71■□□□□ 0.91
ABCA3Q99758 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.71■□□□□ 0.91
ABCA3Q99758 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA3Q99758 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCA3Q99758 TPM3P8-201ENST00000330554 643 ntBASIC20.7■□□□□ 0.9
ABCA3Q99758 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCA3Q99758 DPM3-202ENST00000368399 517 ntBASIC20.7■□□□□ 0.9
ABCA3Q99758 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC20.7■□□□□ 0.9
ABCA3Q99758 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ABCA3Q99758 FGFR3P1-201ENST00000449999 601 ntBASIC20.7■□□□□ 0.9
ABCA3Q99758 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ABCA3Q99758 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ABCA3Q99758 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC20.7■□□□□ 0.9
ABCA3Q99758 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.7■□□□□ 0.9
ABCA3Q99758 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC20.7■□□□□ 0.9
ABCA3Q99758 PCBP2-OT1-201ENST00000634357 590 ntBASIC20.7■□□□□ 0.9
ABCA3Q99758 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ABCA3Q99758 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms