Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.27■□□□□ 0.04
CGREF1Q99674 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CGREF1Q99674 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CGREF1Q99674 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CGREF1Q99674 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CGREF1Q99674 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CGREF1Q99674 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CGREF1Q99674 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CGREF1Q99674 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.27■□□□□ 0.04
CGREF1Q99674 FAM197Y8-203ENST00000450145 560 ntBASIC15.27■□□□□ 0.04
CGREF1Q99674 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CGREF1Q99674 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.27■□□□□ 0.04
CGREF1Q99674 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.27■□□□□ 0.04
CGREF1Q99674 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CGREF1Q99674 AL009183.1-201ENST00000603760 355 ntBASIC15.27■□□□□ 0.04
CGREF1Q99674 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CGREF1Q99674 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CGREF1Q99674 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.27■□□□□ 0.03
CGREF1Q99674 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CGREF1Q99674 AC134407.2-201ENST00000625089 1978 ntBASIC15.27■□□□□ 0.03
CGREF1Q99674 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CGREF1Q99674 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CGREF1Q99674 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CGREF1Q99674 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CGREF1Q99674 AC073439.1-201ENST00000624121 1774 ntBASIC15.26■□□□□ 0.03
CGREF1Q99674 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.26■□□□□ 0.03
CGREF1Q99674 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.26■□□□□ 0.03
CGREF1Q99674 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CGREF1Q99674 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.26■□□□□ 0.03
CGREF1Q99674 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.26■□□□□ 0.03
CGREF1Q99674 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CGREF1Q99674 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.26■□□□□ 0.03
CGREF1Q99674 RPS2P28-201ENST00000314255 741 ntBASIC15.26■□□□□ 0.03
CGREF1Q99674 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CGREF1Q99674 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CGREF1Q99674 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CGREF1Q99674 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.26■□□□□ 0.03
CGREF1Q99674 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.26■□□□□ 0.03
CGREF1Q99674 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.26■□□□□ 0.03
CGREF1Q99674 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
CGREF1Q99674 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.26■□□□□ 0.03
CGREF1Q99674 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.26■□□□□ 0.03
CGREF1Q99674 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.26■□□□□ 0.03
CGREF1Q99674 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.26■□□□□ 0.03
CGREF1Q99674 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.26■□□□□ 0.03
CGREF1Q99674 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.26■□□□□ 0.03
CGREF1Q99674 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CGREF1Q99674 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.26■□□□□ 0.03
CGREF1Q99674 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CGREF1Q99674 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.26■□□□□ 0.03
CGREF1Q99674 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.26■□□□□ 0.03
CGREF1Q99674 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CGREF1Q99674 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CGREF1Q99674 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CGREF1Q99674 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CGREF1Q99674 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CGREF1Q99674 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.25■□□□□ 0.03
CGREF1Q99674 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 AC108751.1-201ENST00000490852 363 ntBASIC15.25■□□□□ 0.03
CGREF1Q99674 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CGREF1Q99674 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.25■□□□□ 0.03
CGREF1Q99674 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.25■□□□□ 0.03
CGREF1Q99674 AC002347.1-201ENST00000569543 541 ntBASIC15.25■□□□□ 0.03
CGREF1Q99674 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.25■□□□□ 0.03
CGREF1Q99674 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms