Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 AC004945.1-201ENST00000416738 983 ntBASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 Z93015.1-201ENST00000451718 390 ntBASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 AC138951.2-201ENST00000623455 1161 ntBASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 AC106820.2-201ENST00000563775 3264 ntBASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 AHCYP2-201ENST00000430630 1300 ntBASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 AC018892.3-201ENST00000623986 2499 ntBASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 AL591846.1-201ENST00000451736 433 ntBASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 AP001258.2-201ENST00000529891 490 ntBASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 AL138799.1-201ENST00000448213 1675 ntBASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRAMP1Q96RY5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 AC104306.2-201ENST00000451877 341 ntBASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.29■□□□□ 0.68
CRAMP1Q96RY5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRAMP1Q96RY5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms