Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.79■□□□□ 0.28
RNF34Q969K3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF34Q969K3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.79■□□□□ 0.28
RNF34Q969K3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RNF34Q969K3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF34Q969K3 AC093512.1-201ENST00000617969 520 ntBASIC16.79■□□□□ 0.28
RNF34Q969K3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
RNF34Q969K3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
RNF34Q969K3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF34Q969K3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF34Q969K3 LINC02199-201ENST00000506655 2702 ntBASIC16.79■□□□□ 0.28
RNF34Q969K3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF34Q969K3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
RNF34Q969K3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF34Q969K3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF34Q969K3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
RNF34Q969K3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RNF34Q969K3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF34Q969K3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF34Q969K3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RNF34Q969K3 AP003680.1-201ENST00000598970 3660 ntBASIC16.78■□□□□ 0.28
RNF34Q969K3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RNF34Q969K3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RNF34Q969K3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RNF34Q969K3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RNF34Q969K3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF34Q969K3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RNF34Q969K3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RNF34Q969K3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.78■□□□□ 0.28
RNF34Q969K3 IGHV3-42-201ENST00000520410 361 ntBASIC16.78■□□□□ 0.28
RNF34Q969K3 AC069120.2-201ENST00000524091 540 ntBASIC16.78■□□□□ 0.28
RNF34Q969K3 RFPL4AP1-201ENST00000530883 850 ntBASIC16.78■□□□□ 0.28
RNF34Q969K3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.78■□□□□ 0.28
RNF34Q969K3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.78■□□□□ 0.28
RNF34Q969K3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF34Q969K3 AC243562.2-201ENST00000561247 970 ntBASIC16.78■□□□□ 0.28
RNF34Q969K3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF34Q969K3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF34Q969K3 AL589739.1-201ENST00000607720 493 ntBASIC16.78■□□□□ 0.28
RNF34Q969K3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF34Q969K3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RNF34Q969K3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RNF34Q969K3 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.78■□□□□ 0.28
RNF34Q969K3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RNF34Q969K3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RNF34Q969K3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF34Q969K3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF34Q969K3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
RNF34Q969K3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF34Q969K3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF34Q969K3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF34Q969K3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
RNF34Q969K3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
RNF34Q969K3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF34Q969K3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RNF34Q969K3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF34Q969K3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RNF34Q969K3 MIR943-201ENST00000401286 94 ntBASIC16.77■□□□□ 0.28
RNF34Q969K3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF34Q969K3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF34Q969K3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.77■□□□□ 0.28
RNF34Q969K3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.77■□□□□ 0.28
RNF34Q969K3 AC140878.1-201ENST00000565277 250 ntBASIC16.77■□□□□ 0.28
RNF34Q969K3 AC015911.4-201ENST00000588022 1070 ntBASIC16.77■□□□□ 0.28
RNF34Q969K3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.77■□□□□ 0.28
RNF34Q969K3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF34Q969K3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.77■□□□□ 0.27
RNF34Q969K3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF34Q969K3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF34Q969K3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF34Q969K3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF34Q969K3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF34Q969K3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF34Q969K3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF34Q969K3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF34Q969K3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF34Q969K3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF34Q969K3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms