Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP2A3Q93084 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP2A3Q93084 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A3Q93084 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.92■□□□□ 0.3
ATP2A3Q93084 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP2A3Q93084 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP2A3Q93084 RN7SL828P-201ENST00000607615 303 ntBASIC16.92■□□□□ 0.3
ATP2A3Q93084 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.92■□□□□ 0.3
ATP2A3Q93084 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A3Q93084 AL358472.5-202ENST00000641448 1267 ntBASIC16.92■□□□□ 0.3
ATP2A3Q93084 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A3Q93084 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A3Q93084 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A3Q93084 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A3Q93084 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP2A3Q93084 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A3Q93084 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A3Q93084 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP2A3Q93084 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP2A3Q93084 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ATP2A3Q93084 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A3Q93084 AL596257.1-201ENST00000641463 2694 ntBASIC16.92■□□□□ 0.3
ATP2A3Q93084 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP2A3Q93084 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 AC105021.1-202ENST00000570572 669 ntBASIC16.91■□□□□ 0.3
ATP2A3Q93084 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 AC004233.3-201ENST00000607794 1269 ntBASIC16.91■□□□□ 0.3
ATP2A3Q93084 AC020765.3-201ENST00000613051 740 ntBASIC16.91■□□□□ 0.3
ATP2A3Q93084 TEX28P1-201ENST00000613479 1221 ntBASIC16.91■□□□□ 0.3
ATP2A3Q93084 TEX28P2-201ENST00000617764 1221 ntBASIC16.91■□□□□ 0.3
ATP2A3Q93084 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2A3Q93084 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2A3Q93084 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 AC006538.1-201ENST00000567905 1585 ntBASIC16.9■□□□□ 0.3
ATP2A3Q93084 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A3Q93084 AC244107.1-201ENST00000442033 332 ntBASIC16.9■□□□□ 0.3
ATP2A3Q93084 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ATP2A3Q93084 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms