Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA4DQ92854 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 KLF2P3-201ENST00000451977 1087 ntBASIC17.17■□□□□ 0.34
SEMA4DQ92854 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 AC125807.1-201ENST00000483097 614 ntBASIC17.17■□□□□ 0.34
SEMA4DQ92854 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 AL138828.2-201ENST00000615812 383 ntBASIC17.17■□□□□ 0.34
SEMA4DQ92854 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SEMA4DQ92854 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SEMA4DQ92854 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 CETN4P-206ENST00000642099 2168 ntBASIC17.16■□□□□ 0.34
SEMA4DQ92854 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 AC009090.5-201ENST00000624886 2285 ntBASIC17.16■□□□□ 0.34
SEMA4DQ92854 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 AC092580.3-201ENST00000430932 139 ntBASIC17.16■□□□□ 0.34
SEMA4DQ92854 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 AC092183.1-201ENST00000469884 875 ntBASIC17.16■□□□□ 0.34
SEMA4DQ92854 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SEMA4DQ92854 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.16■□□□□ 0.34
SEMA4DQ92854 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 DUX4L27-201ENST00000554796 1261 ntBASIC17.15■□□□□ 0.34
SEMA4DQ92854 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.15■□□□□ 0.34
SEMA4DQ92854 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SEMA4DQ92854 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms