Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 FAM220BP-201ENST00000377689 816 ntBASIC15.17■□□□□ 0.02
TM9SF4Q92544 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 AC098859.1-201ENST00000502915 1238 ntBASIC15.17■□□□□ 0.02
TM9SF4Q92544 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 AL138828.2-201ENST00000615812 383 ntBASIC15.17■□□□□ 0.02
TM9SF4Q92544 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 AC092384.3-202ENST00000564646 2873 ntBASIC15.17■□□□□ 0.02
TM9SF4Q92544 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.17■□□□□ 0.02
TM9SF4Q92544 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF4Q92544 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TM9SF4Q92544 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF4Q92544 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF4Q92544 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF4Q92544 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF4Q92544 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF4Q92544 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.15■□□□□ 0.02
TM9SF4Q92544 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.15■□□□□ 0.02
TM9SF4Q92544 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms