Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 YBX1P6-201ENST00000442962 1002 ntBASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RAPGEF4Q8WZA2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 AC106886.4-201ENST00000623557 2502 ntBASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 AC079316.1-201ENST00000548397 411 ntBASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 AC244669.2-201ENST00000612320 853 ntBASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAPGEF4Q8WZA2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 AC005332.8-201ENST00000622750 2735 ntBASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms