Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL9Q8NET4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL9Q8NET4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL9Q8NET4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.56■□□□□ 0.72
RTL9Q8NET4 CU634019.7-201ENST00000624153 1185 ntBASIC19.56■□□□□ 0.72
RTL9Q8NET4 FP236241.2-201ENST00000624906 1185 ntBASIC19.56■□□□□ 0.72
RTL9Q8NET4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RTL9Q8NET4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL9Q8NET4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTL9Q8NET4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL9Q8NET4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL9Q8NET4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTL9Q8NET4 AL121723.1-201ENST00000445194 1519 ntBASIC19.55■□□□□ 0.72
RTL9Q8NET4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.55■□□□□ 0.72
RTL9Q8NET4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.55■□□□□ 0.72
RTL9Q8NET4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL9Q8NET4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.55■□□□□ 0.72
RTL9Q8NET4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL9Q8NET4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTL9Q8NET4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RTL9Q8NET4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.55■□□□□ 0.72
RTL9Q8NET4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.55■□□□□ 0.72
RTL9Q8NET4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
RTL9Q8NET4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.55■□□□□ 0.72
RTL9Q8NET4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL9Q8NET4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.55■□□□□ 0.72
RTL9Q8NET4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTL9Q8NET4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.55■□□□□ 0.72
RTL9Q8NET4 ENPP7P5-201ENST00000541031 1031 ntBASIC19.55■□□□□ 0.72
RTL9Q8NET4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTL9Q8NET4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.55■□□□□ 0.72
RTL9Q8NET4 AC233724.13-201ENST00000598383 410 ntBASIC19.55■□□□□ 0.72
RTL9Q8NET4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RTL9Q8NET4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTL9Q8NET4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL9Q8NET4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL9Q8NET4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTL9Q8NET4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTL9Q8NET4 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.54■□□□□ 0.72
RTL9Q8NET4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL9Q8NET4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 BOLA2P3-201ENST00000404566 256 ntBASIC19.54■□□□□ 0.72
RTL9Q8NET4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTL9Q8NET4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 BTNL10-201ENST00000595971 695 ntBASIC19.54■□□□□ 0.72
RTL9Q8NET4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL9Q8NET4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL9Q8NET4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTL9Q8NET4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL9Q8NET4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RTL9Q8NET4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL9Q8NET4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTL9Q8NET4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.53■□□□□ 0.72
RTL9Q8NET4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL9Q8NET4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.53■□□□□ 0.72
RTL9Q8NET4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RTL9Q8NET4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
RTL9Q8NET4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTL9Q8NET4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.53■□□□□ 0.72
RTL9Q8NET4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
RTL9Q8NET4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTL9Q8NET4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.53■□□□□ 0.72
RTL9Q8NET4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RTL9Q8NET4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTL9Q8NET4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTL9Q8NET4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.53■□□□□ 0.72
RTL9Q8NET4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms