Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 OR7E47P-204ENST00000575924 449 ntBASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DNAAF1Q8NEP3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 AC006486.2-201ENST00000624246 2199 ntBASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 FAAHP1-202ENST00000446499 1238 ntBASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 AC012640.2-201ENST00000561606 901 ntBASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 ACTL9-202ENST00000612068 1252 ntBASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 AC004790.2-201ENST00000623588 572 ntBASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 AL645728.2-201ENST00000641974 660 ntBASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 AC008677.1-201ENST00000519230 1561 ntBASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 AC020658.6-201ENST00000623564 1870 ntBASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DNAAF1Q8NEP3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.15□□□□□ -0.14
DNAAF1Q8NEP3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms