Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 AC134407.2-201ENST00000625089 1978 ntBASIC14.05□□□□□ -0.16
CPEB3Q8NE35 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 AL691432.1-201ENST00000596308 1422 ntBASIC14.05□□□□□ -0.16
CPEB3Q8NE35 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPEB3Q8NE35 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 AL136982.4-201ENST00000437689 1740 ntBASIC14.04□□□□□ -0.16
CPEB3Q8NE35 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 AL512356.2-201ENST00000546955 174 ntBASIC14.04□□□□□ -0.16
CPEB3Q8NE35 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CPEB3Q8NE35 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 BANF1P1-201ENST00000553684 263 ntBASIC14.03□□□□□ -0.16
CPEB3Q8NE35 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 MIR4453-201ENST00000584019 89 ntBASIC14.03□□□□□ -0.16
CPEB3Q8NE35 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPEB3Q8NE35 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CPEB3Q8NE35 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms