Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 AP003680.1-201ENST00000598970 3660 ntBASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 RN7SL818P-201ENST00000485099 259 ntBASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 COX5BP1-201ENST00000507622 393 ntBASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 PRKXP1-201ENST00000561423 1122 ntBASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 RN7SL725P-201ENST00000606439 259 ntBASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 AL451050.2-201ENST00000606967 682 ntBASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 AC007663.3-201ENST00000609632 465 ntBASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 HCG11-201ENST00000411553 5696 ntBASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC168Q8NDH2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 AC026410.3-201ENST00000514280 936 ntBASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 AC022217.1-201ENST00000521069 738 ntBASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 AL590640.2-201ENST00000457038 527 ntBASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 AC093813.1-201ENST00000605066 256 ntBASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 AC006453.4-201ENST00000636949 1252 ntBASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC168Q8NDH2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms