Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 MIR6069-201ENST00000620069 79 ntBASIC16.39■□□□□ 0.21
RTL3Q8N8U3 AL590560.3-201ENST00000623350 461 ntBASIC16.39■□□□□ 0.21
RTL3Q8N8U3 AC008894.3-201ENST00000624324 3103 ntBASIC16.39■□□□□ 0.21
RTL3Q8N8U3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTL3Q8N8U3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 AC241585.1-201ENST00000433527 519 ntBASIC16.38■□□□□ 0.21
RTL3Q8N8U3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 AL512361.1-201ENST00000554200 418 ntBASIC16.38■□□□□ 0.21
RTL3Q8N8U3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 AC005498.2-205ENST00000593218 784 ntBASIC16.38■□□□□ 0.21
RTL3Q8N8U3 AL390754.1-201ENST00000619088 582 ntBASIC16.38■□□□□ 0.21
RTL3Q8N8U3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 AC087499.5-201ENST00000452760 1342 ntBASIC16.38■□□□□ 0.21
RTL3Q8N8U3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RTL3Q8N8U3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.37■□□□□ 0.21
RTL3Q8N8U3 TSSK5P-201ENST00000423978 907 ntBASIC16.37■□□□□ 0.21
RTL3Q8N8U3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.37■□□□□ 0.21
RTL3Q8N8U3 RN7SL618P-201ENST00000477850 296 ntBASIC16.37■□□□□ 0.21
RTL3Q8N8U3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.37■□□□□ 0.21
RTL3Q8N8U3 AC010336.2-201ENST00000564226 506 ntBASIC16.37■□□□□ 0.21
RTL3Q8N8U3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 AL844908.2-201ENST00000609461 460 ntBASIC16.37■□□□□ 0.21
RTL3Q8N8U3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTL3Q8N8U3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms