Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 AC105233.2-201ENST00000523697 349 ntBASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 AF228730.5-201ENST00000530288 346 ntBASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 AC027307.2-201ENST00000591252 911 ntBASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 AC073389.1-201ENST00000595595 795 ntBASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 SPTSSB-204ENST00000617024 1292 ntBASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 AC092902.6-201ENST00000641783 218 ntBASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00346Q8IVM7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 FOXO1B-201ENST00000504678 1527 ntBASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 AKAP8P1-201ENST00000434743 1349 ntBASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 AC098859.1-201ENST00000502915 1238 ntBASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.21□□□□□ -0.13
LINC00346Q8IVM7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00346Q8IVM7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00346Q8IVM7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00346Q8IVM7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00346Q8IVM7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00346Q8IVM7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00346Q8IVM7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00346Q8IVM7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00346Q8IVM7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.21□□□□□ -0.14
LINC00346Q8IVM7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.21□□□□□ -0.14
LINC00346Q8IVM7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.21□□□□□ -0.14
LINC00346Q8IVM7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 AP001282.1-201ENST00000531301 1499 ntBASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 AL022342.1-201ENST00000400363 863 ntBASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 SPDYE11-202ENST00000450699 704 ntBASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms